AgdbNet – antigen sequence database software for bacterial typing
نویسندگان
چکیده
منابع مشابه
Molecular Methods for Bacterial Strain Typing
ABSTRACT Typing of bacteria is an important part of epidemiological studies on nosocomial infections. Bacterial identification methods have dramatically improved in recent years, which is mainly due to advancements in the field of molecular biotechnology. In many cases, molecular techniques have replaced phenotypic typing methods. Currently, a wide r...
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Whole-genome sequencing (WGS) provides the highest resolution analysis for comparison of bacterial isolates in public health microbiology. However, although increasingly being used routinely for some pathogens such as Listeria monocytogenes and Salmonella enterica, the use of WGS is still limited for other organisms, such as Neisseria gonorrhoeae. Multi-antigen sequence typing (NG-MAST) is the ...
متن کاملmolecular methods for bacterial strain typing
abstract typing of bacteria is an important part of epidemiological studies on nosocomial infections. bacterial identification methods have dramatically improved in recent years, which is mainly due to advancements in the field of molecular biotechnology. in many cases, molecular techniques have replaced phenotypic typing methods. currently, a wide range of bacterial typing techniques is...
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Software architectures have the potential to substantially improve the development and evolution of large, complex, multi-lingual, multi-platform, long-running systems. However, in order to achieve this potential, specific architecture-based modeling, analysis, and evolution techniques must be provided. This paper motivates and presents one such technique: a type system for software architectur...
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Bartonella quintana is a worldwide fastidious bacterium of the Alphaproteobacteria responsible for bacillary angiomatosis, trench fever, chronic lymphadenopathy, and culture-negative endocarditis. The recent genome sequencing of a B. quintana isolate allowed us to propose a genome-wide sequence-based typing method. To ensure sequence discrimination based on highly polymorphic areas, we amplifie...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2006
ISSN: 1471-2105
DOI: 10.1186/1471-2105-7-314